ssahaSNP Tool name | ssahaSNP |
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URL | http://www.sanger.ac.uk/resources/software/ssahasnp/ |
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Important features | Polymorphism detection tool. Detects homozygous SNPs and indels by aligning shotgun reads to the finished genome sequence. |
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Citations | |
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Year of publication | Not available |
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Rank by usage frequency | 100 |
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Comments | |
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Function | SNP discovery, Indel discovery |
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Category | Downloadable |
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License | |
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Status | |
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Input file format | FASTA files for reference, FASTQ |
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Output file format | |
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Operating system |
Mac OS X, Linux 64, Linux, Solaris, Compaq Alpha |
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Operating language | |
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Platform | |
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Maintained by | Wellcome Trust Sanger Institute
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Downloadable file format | |
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Submission file format | |
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